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  1. Kareh, Kristina (Ed.)
    Mechanical metamaterials at the microscale exhibit exotic static properties owing to their en- gineered building blocks, but their dynamic properties have remained significantly less explored. Their design principles can target frequency-dependent properties and resilience upon high-strain-rate deformation, making them versatile materials for applications in lightweight impact resistance, acoustic waveguiding, or vibration damping. However, accessing dynamic properties at small scales has remained a challenge due to low-throughput and destructive characterization, or lack of existing testing protocols. Here we demonstrate a high-throughput non-contact framework that employs MHz-wave propagation signatures within a metamaterial to nondestructively extract dynamic linear properties, omnidirectional elastic information, damping properties, and defect quantification. Using rod-like tessellations of microscopic metamaterials, we report up to 94% direction- and rate-dependent dynamic stiffening at strain rates approaching 10^2 s^{−1}, in addition to damping properties 3 times higher than their constituent materials. We also show that frequency shifts in the vibrational response allow for characterization of invisible defects within the metamaterials, and that selective probing allows for construction of experimental elastic surfaces, previously only possible computationally. Our work provides a route for accelerated data-driven discovery of materials and microdevices for dynamic applications such as protective structures, medical ultrasound, or vibration isolation. 
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    Free, publicly-accessible full text available November 16, 2024
  2. Abstract Strong purifying selection is considered a major evolutionary force behind small microbial genomes in the resource-poor photic ocean. However, very little is currently known about how the size of prokaryotic genomes evolves in the global ocean and whether patterns reflect shifts in resource availability in the epipelagic and relatively stable deep-sea environmental conditions. Using 364 marine microbial metagenomes, we investigate how the average genome size of uncultured planktonic prokaryotes varies across the tropical and polar oceans to the hadal realm. We find that genome size is highest in the perennially cold polar ocean, reflecting elongation of coding genes and gene dosage effects due to duplications in the interior ocean microbiome. Moreover, the rate of change in genome size due to temperature is 16-fold higher than with depth up to 200 m. Our results demonstrate how environmental factors can influence marine microbial genome size selection and ecological strategies of the microbiome. 
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    Free, publicly-accessible full text available December 1, 2024
  3. Free, publicly-accessible full text available August 1, 2024
  4. Magnetic particle imaging (MPI) is a novel biomedical imaging modality that allows non-invasive, tomographic, and quantitative tracking of the distribution of superparamagnetic iron oxide nanoparticle (SPION) tracers. While MPI possesses high sensitivity, detecting nanograms of iron, it does not provide anatomical information. Computed tomography (CT) is a widely used biomedical imaging modality that yields anatomical information at high resolution. A multimodal imaging agent combining the benefits of MPI and CT imaging would be of interest. Here we combine MPI-tailored SPIONs with CT-contrast hafnium oxide (hafnia) nanoparticles using flash nanoprecipitation to obtain dual-imaging MPI/CT agents. Co-encapsulation of iron oxide and hafnia in the composite nanoparticles was confirmed via transmission electron microscopy and elemental mapping. Equilibrium and dynamic magnetic characterization show a reduction in effective magnetic diameter and changes in dynamic magnetic susceptibility spectra at high oscillating field frequencies, suggesting magnetic interactions within the composite dual imaging tracers. The MPI performance of the dual imaging agent was evaluated and compared to the commercial tracer ferucarbotran. The dual-imaging agent has MPI sensitivity that is ∼3× better than this commercial tracer. However, worsening of MPI resolution was observed in the composite tracer when compared to individually coated SPIONs. This worsening resolution could result from magnetic dipolar interactions within the composite dual imaging tracer. The CT performance of the dual imaging agent was evaluated in a pre-clinical animal scanner and a clinical scanner, revealing better contrast compared to a commercial iodine-based contrast agent. We demonstrate that the dual imaging agent can be differentiated from the commercial iodine contrast agent using dual energy CT (DECT) imaging. Furthermore, the dual imaging agent displayed energy-dependent CT contrast arising from the combination of SPION and hafnia, making it potentially suitable for virtual monochromatic imaging of the contrast agent distribution using DECT. 
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    Free, publicly-accessible full text available May 30, 2024
  5. Free, publicly-accessible full text available June 1, 2024
  6. Free, publicly-accessible full text available June 14, 2024
  7. Wheat, Christopher (Ed.)
    Abstract We present a chromosome-length genome assembly and annotation of the Black Petaltail dragonfly (Tanypteryx hageni). This habitat specialist diverged from its sister species over 70 million years ago, and separated from the most closely related Odonata with a reference genome 150 million years ago. Using PacBio HiFi reads and Hi-C data for scaffolding we produce one of the most high-quality Odonata genomes to date. A scaffold N50 of 206.6 Mb and a single copy BUSCO score of 96.2% indicate high contiguity and completeness. 
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  8. Given a finite point set P in the plane, a subset S⊆P is called an island in P if conv(S) ⋂ P = S . We say that S ⊂ P is a visible island if the points in S are pairwise visible and S is an island in P. The famous Big-line Big-clique Conjecture states that for any k ≥ 3 and l ≥ 4, there is an integer n = n(k, l ), such that every finite set of at least n points in the plane contains l collinear points or k pairwise visible points. In this paper, we show that this conjecture is false for visible islands, by replacing each point in a Horton set by a triple of collinear points. Hence, there are arbitrarily large finite point sets in the plane with no 4 collinear members and no visible island of size 13. 
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